The detailed information of tRNA gene sequence


Sequence ID>W2011610798
Genome IDSJPS01000008
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetes bacterium Pla144 [SJPS]
Start position on genome 43059
End posion on genome 42970
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagcactttt
tRNA gene sequence 
GGAAGGTAGCCGGATACGGCTCGCCGGGCCGGTTTGCTAAACCGTGCGACTCCACAAGGG
TCATGTGGGTTCAAATCCCATGCCTTCCGCtg
Downstream region at tRNA end position 
gatgttgttt
Secondary structure (Cloverleaf model)
>W2011610798	Ser	GCT
                   t      GCtg gatgttgttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T + G          T A
                    A     T A C C C     A
    C A T A        G      + | | | |     A
  G         G G C C       G T G G G     C
  G         | | | |                 T T
  C         C C G G
    T C G          G     GCGACTCCACAAGGGTCAT
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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