The detailed information of tRNA gene sequence


Sequence ID>SRA1046980
Genome IDSRR035093.429545
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 39
End posion on genome 116
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tagtaaaagt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGTCGATCGCCTGTCACGCGATAGGTCGAGGGTTCGA
GTCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
cttttcttaa
Secondary structure (Cloverleaf model)
>SRA1046980	Asp	GTC
                   t      GCCA cttttcttaa
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
    T T G A        A      + | | | |     G
  G         C T C G       G A G G G     C
  G           +   |                 T T
  T         A G T C
    T A G          G     AGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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