The detailed information of tRNA gene sequence


Sequence ID>W2011633683
Genome IDSMFV01000001
Search identical group
Phylum/ClassAquificota
SpeciesPhorcysia thermohydrogeniphila DSM 24425 [SMFV]
Start position on genome 505079
End posion on genome 505155
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
caccaaaagt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGCCGGCTCATAACCGGCTGGTCGGAGGTTCGAG
TCCTCCCGGGCCCACCA
Downstream region at tRNA end position 
tttttttatt
Secondary structure (Cloverleaf model)
>W2011633683	Ile2	CAT
                   t      ACCA tttttttatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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