The detailed information of tRNA gene sequence


Sequence ID>W2011633719
Genome IDSMFV01000007
Search identical group
Phylum/ClassAquificota
SpeciesPhorcysia thermohydrogeniphila DSM 24425 [SMFV]
Start position on genome 37489
End posion on genome 37397
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctccttgcac
tRNA gene sequence 
GGAGGGGTGCCCGAGCGGTCGAAGGGGCACGACTGGAAATCGTGTGTACCCCTAAAAGGG
GTACCGCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
ttttaatttg
Secondary structure (Cloverleaf model)
>W2011633719	Ser	GGA
                   c      GCCA ttttaatttg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TGTACCCCTAAAAGGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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