The detailed information of tRNA gene sequence


Sequence ID>W2011643741
Genome IDSNNQ01001095
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirales bacterium LBB_01 [SNNQ]
Start position on genome 4979
End posion on genome 4892
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagttgttaa
tRNA gene sequence 
GGAGAGGTTGCCGAGCGGTTTAAGGCGGCGGTCTCGAAAATCGTTGTGGGGGTGACTCCA
CCGGGGGTTCGAATCCCCCCCTCTCCGCtg
Downstream region at tRNA end position 
tttttatcgt
Secondary structure (Cloverleaf model)
>W2011643741	Ser	CGA
                   a      GCtg tttttatcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        T      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTGGGGGTGACTCCACC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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