The detailed information of tRNA gene sequence


Sequence ID>SRA1047201
Genome IDSRR035093.480897
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 127
End posion on genome 50
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggggtactT
tRNA gene sequence 
CACAGGTTAGCTCAGTGGTAAGAGCGCCGGGCTCATAACCCGGAGGTCAGTGGTTCGATT
CCATTACCTGTAATCC
Downstream region at tRNA end position 
Aaaaaccctt
Secondary structure (Cloverleaf model)
>SRA1047201	Met	CAT
                   T      ATCC Aaaaaccctt
                     C   A
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A          T T
                    T     T T A C C     A
      T G A        A      | + | | |     G
    G       C T C G       A G T G G     C
    G       | | | |                 T T
    T       G A G C
      A A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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