The detailed information of tRNA gene sequence


Sequence ID>W2011656251
Genome IDSOCJ01000002
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia caballeronis TNe-8683 [SOCJ]
Start position on genome 118203
End posion on genome 118290
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttttgttgtt
tRNA gene sequence 
GGGCCGGACGCCGTGCTGGTTGCAGGCAGCGGACTCATAATCCGCCTCCGAAAGGACACC
GTGGGTTCGACTCCCACCCGGCCCACCA
Downstream region at tRNA end position 
gggtttttgg
Secondary structure (Cloverleaf model)
>W2011656251	Ile2	CAT
                   t      ACCA gggtttttgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    A     C A C C C     A
    T C G T        C      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    T G C          A     CTCCGAAAGGACACC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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