The detailed information of tRNA gene sequence


Sequence ID>SRA1047313
Genome IDSRR035093.508074
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 529
End posion on genome 457
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gacctatgaa
tRNA gene sequence 
GGGCGGTTAGCTCAACGGTTAGAGCAAGAAACTCATAATTTTTAGGTTACAGGTTCGAAT
CCTGTACCGCCCAtta
Downstream region at tRNA end position 
ctgtagctta
Secondary structure (Cloverleaf model)
>SRA1047313	Met	CAT
                   a      Atta ctgtagctta
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
      C A A        A      | | | | |     G
    G       C T C G       A C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTT
                    A - T
                    G + T
                    A - T
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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