The detailed information of tRNA gene sequence


Sequence ID>W2011679411
Genome IDSRME01000004
Search identical group
Phylum/ClassThermotogota
SpeciesGeotoga petraea HO-Geo1 [SRME]
Start position on genome 28783
End posion on genome 28708
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cggataaata
tRNA gene sequence 
CGGAGCGTAGCGCAGTCGGTAGCGCGCCGGTCTTGGGAACCGGAGGTCGCTGGTTCGATC
CCAGTCGCTCCGACCA
Downstream region at tRNA end position 
aaaaattata
Secondary structure (Cloverleaf model)
>W2011679411	Pro	TGG
                   a      ACCA aaaaattata
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          C T
                    T     T G A C C     A
      T G A        A      + | | | |     G
    C       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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