The detailed information of tRNA gene sequence


Sequence ID>SRA1047539
Genome IDSRR035093.572213
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 60
End posion on genome 151
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctagcaaat
tRNA gene sequence 
GGAGACGTCGCATAGCCCGGTCTAGTGCGCCCGCCTGCTAAGTGGGTAGGGGACCAAAAT
CCCCTCGAGGGTTCGAATCCCTCCGTCTCCGCtc
Downstream region at tRNA end position 
taaacccaca
Secondary structure (Cloverleaf model)
>SRA1047539	Ser	GCT
                   t      GCtc taaacccaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C C G A        C      | | | | |     G
  C         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TAGGGGACCAAAATCCCCTC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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