The detailed information of tRNA gene sequence


Sequence ID>SRA1047582
Genome IDSRR035093.590146
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 309
End posion on genome 217
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgaacattaa
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAAGCGCACGCTTTGGAAACGTGTGTGTACCTGTTAAAG
GTACCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gaatgcaata
Secondary structure (Cloverleaf model)
>SRA1047582	Pro	TGG
                   a      GCCA gaatgcaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TGTGTACCTGTTAAAGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C   A
                  T       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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