The detailed information of tRNA gene sequence


Sequence ID>W2011691551
Genome IDSSNX01000003
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus sp. KSM4-11 [SSNX]
Start position on genome 202185
End posion on genome 202274
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcaccccacc
tRNA gene sequence 
GGAGGGATGGCAGAGTCCGGCTGATTGCACCCGCTTGCTAGGCGGGAGGGGTGTACGCCC
CCGCAGGTTCGAATCCTGCTCCCTTCGCCA
Downstream region at tRNA end position 
atgcaccgcc
Secondary structure (Cloverleaf model)
>W2011691551	Ser	GCT
                   c      GCCA atgcaccgcc
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
    C T G A        G      | | | | |     G
  C         G A C G       G C A G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        A     AGGGGTGTACGCCCCC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       G
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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