The detailed information of tRNA gene sequence


Sequence ID>SRA1047707
Genome IDSRR035094.25563
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 422
End posion on genome 347
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aactcgatgc
tRNA gene sequence 
AGGTTAGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCAAGT
CCTGCCTGACCTGCCA
Downstream region at tRNA end position 
gtttttatag
Secondary structure (Cloverleaf model)
>SRA1047707	Trp	CCA
                   c      GCCA gtttttatag
                     A - T
                     G - C
                     G - C
                     T - A
                     T + G
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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