The detailed information of tRNA gene sequence


Sequence ID>SRA1047713
Genome IDSRR035094.27355
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 215
End posion on genome 126
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgattgaaat
tRNA gene sequence 
GGAGAGTTGCCGGAGTGGCCGAACGGGGCGGTTTCGAAAACCGCTGTACCAGCGATGGTA
CCGGGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
gaaaaccaaa
Secondary structure (Cloverleaf model)
>SRA1047713	Ser	CGA
                   t      GCCA gaaaaccaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TGTACCAGCGATGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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