The detailed information of tRNA gene sequence


Sequence ID>SRA1047789
Genome IDSRR035094.41808
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 32
End posion on genome 107
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaccttta
tRNA gene sequence 
GCCGGTGTAGCTCAGTGGTTAGAGCAAAATCTTCATAAGGTTGAGGTCGTTGGTTCAATT
CCAACCACCGGCACTA
Downstream region at tRNA end position 
tatccttgaa
Secondary structure (Cloverleaf model)
>SRA1047789	Met	CAT
                   a      ACTA tatccttgaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C A A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTC
                    A   G
                    A - T
                    A - T
                    T + G
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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