The detailed information of tRNA gene sequence


Sequence ID>SRA1047816
Genome IDSRR035094.46417
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 231
End posion on genome 320
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgagtgctt
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTCGAAGGCGGCGGTCTTGAAAACCGTTGATCTGGTGACAGGT
CCGGAGGTTCGAATCCTCTCTCCTCCGCTA
Downstream region at tRNA end position 
tcaggaaaga
Secondary structure (Cloverleaf model)
>SRA1047816	Ser	TGA
                   t      GCTA tcaggaaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G G A G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGATCTGGTGACAGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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