The detailed information of tRNA gene sequence


Sequence ID>SRA1047842
Genome IDSRR035094.52252
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 24
End posion on genome 98
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaacatagT
tRNA gene sequence 
GCCGGTGTAGCTCATCGGTTAGAGCAGCGCTCTCATAAGGCGAAGGCAAGAGGTTCAACT
CCTCTCATCGGCAAaa
Downstream region at tRNA end position 
taaaatggag
Secondary structure (Cloverleaf model)
>SRA1047842	Met	CAT
                   T      AAaa taaaatggag
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     T - A
                     G - C          T C
                    T     T C T C C     A
      C T A        A      | | | | |     A
    G       C T C G       A G A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGCA
                    G   A
                    C - G
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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