The detailed information of tRNA gene sequence


Sequence ID>SRA1047866
Genome IDSRR035094.58288
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 431
End posion on genome 342
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgaatacct
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGACGATTGGGGCTGCCTGCTAAGCAGTTGTGGGGGTAACTCCA
CCCAGGGTTCGAATCCCTGCCTCTCCGCCT
Downstream region at tRNA end position 
agacgatgaa
Secondary structure (Cloverleaf model)
>SRA1047866	Ser	GCT
                   t      GCCT agacgatgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        G     TGTGGGGGTAACTCCACC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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