The detailed information of tRNA gene sequence


Sequence ID>SRA1047907
Genome IDSRR035094.65164
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 114
End posion on genome 198
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatcttcaaa
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTATTGCATCAGTTTCGAAAGCTGACGCCGAAAGGGCTTCG
TGGGTTCGACTCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
aacnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1047907	Ser	CGA
                   a      GCtc aacnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G         | | |                 T T
    T       T T G C
      C T A        A     CGCCGAAAGGGCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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