The detailed information of tRNA gene sequence


Sequence ID>SRA1047909
Genome IDSRR035094.65390
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 297
End posion on genome 223
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cccctttttT
tRNA gene sequence 
TGGAGTAAAGCTCAGCAGGCAGAGCATTCGCTTGATAAGCGAAAGGCCGAAGGTTCGAAT
CCTTCTGCTCCAATta
Downstream region at tRNA end position 
aacgggttga
Secondary structure (Cloverleaf model)
>SRA1047909	Ile	GAT
                   T      ATta aacgggttga
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T          T A
                    A     C T T C C     A
      C G A        A      | | | | |     G
    A       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGCC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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