The detailed information of tRNA gene sequence


Sequence ID>SRA1047933
Genome IDSRR035094.70097
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 98
End posion on genome 187
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cactgcacac
tRNA gene sequence 
GGAGGGATGGCAGAGCGGACGATTGCGGCGGTCTTGAAAACCGTTGTGGGGGCAACCTCA
CCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
gtacaaccga
Secondary structure (Cloverleaf model)
>SRA1047933	Ser	TGA
                   c      GCCA gtacaaccga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     TGTGGGGGCAACCTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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