The detailed information of tRNA gene sequence


Sequence ID>SRA1048001
Genome IDSRR035094.85078
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 218
End posion on genome 144
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cctgtttgac
tRNA gene sequence 
GGGTGCGTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCACTGGTTCGAG
TCCAGTCGTGCCCACtt
Downstream region at tRNA end position 
ccgtgcaact
Secondary structure (Cloverleaf model)
>SRA1048001	Val	CAC
                   c      ACtt ccgtgcaact
                     G - C
                     G - C
                     G - C
                     T + G
                     G + T
                     C - G
                     G - C          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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