The detailed information of tRNA gene sequence


Sequence ID>SRA1048052
Genome IDSRR035094.98834
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 106
End posion on genome 32
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acctgtcttg
tRNA gene sequence 
GGTGCGGTGGCGAAGTGGAAACGCCGGGGTCTGCAAAACCTCTATGCGCGGGTTCGATTC
CCGCCCGCACCTCAA
Downstream region at tRNA end position 
aattagaagt
Secondary structure (Cloverleaf model)
>SRA1048052	Cys	GCA
                   g      TCAA aattagaagt
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     C G C C C     A
        G A        G      | | | | |     G
      T     A G C G       G C G G G     C
      G       | | |                 T T
      G     A C G C
        A A        C     TATGC
                    G - C
                    G + T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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