The detailed information of tRNA gene sequence


Sequence ID>SRA1048080
Genome IDSRR035094.105399
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 89
End posion on genome 159
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccagtaaaac
tRNA gene sequence 
GGGCCCGTAGTCTAGTGGTAGAATACTTCGCTTGCACCGAAGATACCCGCGTTCAATTCG
CGGCGGGTCCAttt
Downstream region at tRNA end position 
cgaaagaaat
Secondary structure (Cloverleaf model)
>SRA1048080	Ala	TGC
                   c      Attt cgaaagaaat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     G G C G C     A
        G A        A      | | | | |     A
      T     T C T G       C C G C G     C
      G     +   | +                 T T
      G     G A A T
        T A        A     ATAC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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