The detailed information of tRNA gene sequence


Sequence ID>SRA1048116
Genome IDSRR035094.112727
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 233
End posion on genome 158
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggtgaattct
tRNA gene sequence 
GGGCGGTTTAACTCAGCGGGAGAGTGCTACCTTCACACGGTAGAAGTCACTGGTTCAAAT
CCAGTACCGCCTACCA
Downstream region at tRNA end position 
tgaaatcaag
Secondary structure (Cloverleaf model)
>SRA1048116	Val	CAC
                   t      ACCA tgaaatcaag
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G A C C     A
      G A C        T      | | | | |     A
    C       T C A A       A C T G G     C
    G       +     |                 T T
    G       G A G T
      G A          G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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