The detailed information of tRNA gene sequence


Sequence ID>SRA1048138
Genome IDSRR035094.114951
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 419
End posion on genome 326
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccgaaaaat
tRNA gene sequence 
GGAGAGATGTCCGAGCGGCTGAAGGAGCACGACTGGAAATCGTGTGTATGCCCTCAAAGG
TGTACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
tatgttttca
Secondary structure (Cloverleaf model)
>SRA1048138	Ser	GGA
                   t      GCCA tatgttttca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTATGCCCTCAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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