The detailed information of tRNA gene sequence


Sequence ID>SRA1048140
Genome IDSRR035094.115064
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 218
End posion on genome 124
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcttcacttc
tRNA gene sequence 
GGAGAGGTGTCGGAGTGGTTTAACGAGCACGCTTGGAAAGCGTGTGTATGCGGCAAAACC
GTGTACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttccttaatt
Secondary structure (Cloverleaf model)
>SRA1048140	Ser	GGA
                   c      GCCA ttccttaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C T       G A G G G     C
    G         | | |                 T T
    T       A C G A
      T T A        G     TGTATGCGGCAAAACCGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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