The detailed information of tRNA gene sequence


Sequence ID>SRA1048159
Genome IDSRR035094.119979
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 423
End posion on genome 351
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
nnnnnagtaa
tRNA gene sequence 
GGGGCGTTAGCTCAATTGGTAGAGCGCAACAATGGCATTGTTGAGGTCAACGGTTCGATC
CCGTTACGCTCCAttt
Downstream region at tRNA end position 
ctattaatat
Secondary structure (Cloverleaf model)
>SRA1048159	Ala	GGC
                   a      Attt ctattaatat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A          C T
                    T     T T G C C     A
      T A A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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