The detailed information of tRNA gene sequence


Sequence ID>SRA1048171
Genome IDSRR035094.122042
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 300
End posion on genome 390
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taatcttctc
tRNA gene sequence 
GGAGAGGTCGCATAGTCTGGCCGAGTGCGCGCGTCTCGAAAACGCGTAGGGTTAACCGCC
CTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cgcaatccga
Secondary structure (Cloverleaf model)
>SRA1048171	Ser	CGA
                   c      GCCA cgcaatccga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C G A        G     TAGGGTTAACCGCCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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