The detailed information of tRNA gene sequence


Sequence ID>SRA1048173
Genome IDSRR035094.122200
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 285
End posion on genome 212
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aatcccaacG
tRNA gene sequence 
GGGCTTGTGGCGCAGTTGGGAGCGCGTCTGCATGGCATGCAGAAGGTCCAGGGTTCGATT
CCCTGCAGCTCCAtaa
Downstream region at tRNA end position 
agaaaagtct
Secondary structure (Cloverleaf model)
>SRA1048173	Ala	GGC
                   G      Ataa agaaaagtct
                     G - C
                     G - C
                     G + T
                     C   C
                     T + G
                     T - A
                     G - C          T T
                    T     G T C C C     A
      T G A        G      | | | | |     G
    T       C G C G       C A G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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