The detailed information of tRNA gene sequence


Sequence ID>SRA1048177
Genome IDSRR035094.122427
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 122
End posion on genome 46
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtagttcac
tRNA gene sequence 
GGCAGGGTAGCTCAGTCGGTTAGAGCGCGGGACTCATAAGCCCGAGGTCGCGAGTTCAAT
TCTCGCCCCTGCTACCA
Downstream region at tRNA end position 
ctcgcttcgt
Secondary structure (Cloverleaf model)
>SRA1048177	Met	CAT
                   c      ACCA ctcgcttcgt
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T T
                    T     C G C T C     A
      T G A        A      | | | | |     A
    C       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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