The detailed information of tRNA gene sequence


Sequence ID>SRA1048179
Genome IDSRR035094.123466
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 101
End posion on genome 188
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acataaattt
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTTGAATGCGGCGCATTCGAAATGCGTTGTGCCCTTGGGTACC
GGGGGTTCGAATCCTCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttctgcttcg
Secondary structure (Cloverleaf model)
>SRA1048179	Ser	CGA
                   t      GCCA ttctgcttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C T C C     A
      C G A        G      | | + | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TGTGCCCTTGGGTACC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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