The detailed information of tRNA gene sequence


Sequence ID>SRA1048180
Genome IDSRR035094.123554
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 406
End posion on genome 482
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agaaaaattc
tRNA gene sequence 
GGCCCTGTCGTCTAACGGCTTAGGACGCTGGCCTCTCACGCCGGTAATAGGGGTTCGATT
CCCCTTGGGGGCCACC
Downstream region at tRNA end position 
Ggtagattaa
Secondary structure (Cloverleaf model)
>SRA1048180	Glu	CTC
                   c      CACC Ggtagattaa
                     G - C
                     G   G
                     C - G
                     C - G
                     C - G
                     T + G
                     G + T          T T
                    T     T C C C C     A
      C A A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      T T A        G     TAAT
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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