The detailed information of tRNA gene sequence


Sequence ID>SRA1048189
Genome IDSRR035094.125523
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 335
End posion on genome 262
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaccgaatat
tRNA gene sequence 
GGGCCTATAGTTCAGTGGTAGAATAACGGTTTCCAAAACCGTCGACCGAGGTTCAAGTCC
TCGTGGGCCCGCAA
Downstream region at tRNA end position 
tgatgccgta
Secondary structure (Cloverleaf model)
>SRA1048189	Trp	CCA
                   t      GCAA tgatgccgta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G C T C C     A
        G A        A      | | | | |     A
      T     C T T G       C G A G G     C
      G     | | | +                 T T
      G     G A A T
        T A        A     CGAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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