The detailed information of tRNA gene sequence


Sequence ID>SRA1048212
Genome IDSRR035094.129545
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 246
End posion on genome 158
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agctaaattc
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTTTATCGGAACTGCCTGCTAAGCAGTTGAGCCTTTTTGGTTC
CCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
attttcactt
Secondary structure (Cloverleaf model)
>SRA1048212	Ser	GCT
                   c      GCCA attttcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G       + | | |                 T T
    T       T C G G
      T T A        A     TGAGCCTTTTTGGTTCC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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