The detailed information of tRNA gene sequence


Sequence ID>SRA1048257
Genome IDSRR035094.135589
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 474
End posion on genome 401
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tctcgctcca
tRNA gene sequence 
GGTCTGGTAGAAAAGTGGCAATTCAGCGGATTGCAAACCCGCCATCGTGAGTTCGACCCT
CACTCAGACCTCAA
Downstream region at tRNA end position 
ttcgggaatt
Secondary structure (Cloverleaf model)
>SRA1048257	Cys	GCA
                   a      TCAA ttcgggaatt
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G + T          C C
                    T     C A C T C     A
        G A        A      | | | | |     G
      T     A A A G       G T G A G     C
      G       | | |                 T T
      G     A T T C
        C A        A     CATC
                    G - C
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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