The detailed information of tRNA gene sequence


Sequence ID>SRA1048272
Genome IDSRR035094.137593
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 309
End posion on genome 233
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caaattaatt
tRNA gene sequence 
GGGCCATTAGCTCAGCTGGCTAGAGCGCCTGCTTTGCAAGCAGGAGGTCAAGGGTTCGAG
TCCCTTATGGTCCACAA
Downstream region at tRNA end position 
gtaacctgat
Secondary structure (Cloverleaf model)
>SRA1048272	Ala	TGC
                   t      ACAA gtaacctgat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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