The detailed information of tRNA gene sequence


Sequence ID>SRA1048275
Genome IDSRR035094.138200
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 228
End posion on genome 153
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aacaaggttt
tRNA gene sequence 
GGGGCGGTAGCTCATTTGGTAGAGCACCACGTTCGCAACGTGGGGGTAGGGAGTTCGATC
CTCCTCCGCTCCACCA
Downstream region at tRNA end position 
gtcttcgtcc
Secondary structure (Cloverleaf model)
>SRA1048275	Ala	CGC
                   t      ACCA gtcttcgtcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C          C T
                    T     T C C T C     A
      T T A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTA
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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