The detailed information of tRNA gene sequence


Sequence ID>SRA1048288
Genome IDSRR035094.139801
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 142
End posion on genome 67
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgaagtatt
tRNA gene sequence 
AGGGGAGTAGCTCAGCTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCGGGTTCGATC
CCTGTCTCCCCTGCAA
Downstream region at tRNA end position 
aagcgatcga
Secondary structure (Cloverleaf model)
>SRA1048288	Trp	CCA
                   t      GCAA aagcgatcga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          C T
                    T     T G T C C     A
      C G A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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