The detailed information of tRNA gene sequence


Sequence ID>SRA1048295
Genome IDSRR035094.141142
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 166
End posion on genome 237
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaatataaa
tRNA gene sequence 
ATCTCGTTAGTTCAATGGTTAGAATACTGGTCTCATGAGCCAGAGATGTTTGTTCGATTC
AATCACGAGATAttc
Downstream region at tRNA end position 
ccaatgcctt
Secondary structure (Cloverleaf model)
>SRA1048295	Met	CAT
                   a      Attc ccaatgcctt
                     A - T
                     T - A
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     C T A A C     A
      T A A        A      |   | | |     G
    G       C T T G       G T T T G     C
    G       | | | +                 T T
    T       G A A T
      T A          A     AGAT
                    C - G
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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