The detailed information of tRNA gene sequence


Sequence ID>SRA1048297
Genome IDSRR035094.141505
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 171
End posion on genome 96
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agatactttT
tRNA gene sequence 
GGCGGCGTAGCTCAGGCTGGTAGAGCAAACGGCTCATACCCGTTTTGTCGGTGGTTCAAG
TCCACTCGCCGCCATta
Downstream region at tRNA end position 
taattaaagt
Secondary structure (Cloverleaf model)
>SRA1048297	Met	CAT
                   T      ATta taattaaagt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C A C C     A
      G G A        A      + | | | |     A
    C       C T C G       G G T G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     TTGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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