The detailed information of tRNA gene sequence


Sequence ID>SRA1048316
Genome IDSRR035094.146069
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 149
End posion on genome 76
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcaatattgc
tRNA gene sequence 
GGCGGAATGGCAGAATGGCTATGCACCGGATTGCAAATCCGTGAATCTCGGTTCGACTCC
GGGTTCCGCCTCCA
Downstream region at tRNA end position 
atcaatgcta
Secondary structure (Cloverleaf model)
>SRA1048316	Cys	GCA
                   c      TCCA atcaatgcta
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    T     G G G C C     A
        A A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C T        A     GAAT
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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