The detailed information of tRNA gene sequence


Sequence ID>SRA1048337
Genome IDSRR035094.149915
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 222
End posion on genome 146
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caaaagcttc
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGCTAGAGCGCTAGATTTGCATTCTAGAGGTCAAGGGTTCGAC
TCCCTTATTCTCCACCA
Downstream region at tRNA end position 
tcgccctacg
Secondary structure (Cloverleaf model)
>SRA1048337	Ala	TGC
                   c      ACCA tcgccctacg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T C
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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