The detailed information of tRNA gene sequence


Sequence ID>SRA1048339
Genome IDSRR035094.150046
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 408
End posion on genome 324
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtactttaat
tRNA gene sequence 
GGAGGGTTGGCCGAGTGGTTTATGGCGCTGGTTTCGAAAATCAGTGTTCGAAAGGACGCA
CAGGTTCGAATCCTGTACCCTCCGCag
Downstream region at tRNA end position 
gaacataatt
Secondary structure (Cloverleaf model)
>SRA1048339	Ser	CGA
                   t      GCag gaacataatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
      T G A        G      | | | | |     G
    G       G C C G       A C A G G     C
    G       + | | |                 T T
    T       T G G C
      T T A        G     TGTTCGAAAGGACGC
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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