The detailed information of tRNA gene sequence


Sequence ID>SRA1048361
Genome IDSRR035094.157033
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 39
End posion on genome 136
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gaaacgcaga
tRNA gene sequence 
GGAAGTGGAAAGGTCACTGGTGGGCCTCCTGGACTTCAAATCCAGTGGAAGGCGTGAGAA
GCGTCTTCGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tttataagat
Secondary structure (Cloverleaf model)
>SRA1048361	SeC	TCA
                   a      GCCA tttataagat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGGAAGGCGTGAGAAGCGTCTTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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