The detailed information of tRNA gene sequence


Sequence ID>SRA1048388
Genome IDSRR035094.162376
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 441
End posion on genome 527
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttagggtgcc
tRNA gene sequence 
GGAGGGATGGCCGAAGTGGGTTGAAGGCGGCGGTCTTGAAAACCGTTGAACGAAAGTTCC
GTGGGTTCGAATCCTACTCCCTCGCCAa
Downstream region at tRNA end position 
cactangtca
Secondary structure (Cloverleaf model)
>SRA1048388	Ser	TGA
                   c      CCAa cactangtca
                     G   G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
    T G A A        G      | | + | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TGAACGAAAGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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