The detailed information of tRNA gene sequence


Sequence ID>SRA1048391
Genome IDSRR035094.162535
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 160
End posion on genome 85
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gagacgagga
tRNA gene sequence 
GGGCTCGTAGCTCAATAGGTAGAGCGCCACTTTTGCATAGTGGAGGTAGCCAGTTCGAAT
CTGGCCGGGTCCACCA
Downstream region at tRNA end position 
ccctacgctc
Secondary structure (Cloverleaf model)
>SRA1048391	Ala	TGC
                   a      ACCA ccctacgctc
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G G T C     A
      T A A        A      | | | | |     G
    A       C T C G       G C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTA
                    C - G
                    C - G
                    A - T
                    C - G
                    T - A
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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