The detailed information of tRNA gene sequence


Sequence ID>SRA1048411
Genome IDSRR035094.166876
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 145
End posion on genome 219
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataaagaaat
tRNA gene sequence 
AGGCCTGTAGCTCTAACTGGTAGAGCGTCGGACTCCAAATCCGAGTGTTGGGGGTTCGAG
TCCCTCCAGGCCTGCtg
Downstream region at tRNA end position 
tcttcagaaa
Secondary structure (Cloverleaf model)
>SRA1048411	Trp	CCA
                   t      GCtg tcttcagaaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     GTGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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