The detailed information of tRNA gene sequence


Sequence ID>SRA1048436
Genome IDSRR035094.173552
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 344
End posion on genome 254
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtttagctaT
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGTCGAAAGGAACTCACTGCTAACGAGTCATAGGCCCAAAAGCC
TATCGCGGGTTCGAATCCCGCCCTCTCCGTat
Downstream region at tRNA end position 
cttaaataaa
Secondary structure (Cloverleaf model)
>SRA1048436	Ser	GCT
                   T      GTat cttaaataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G C G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CATAGGCCCAAAAGCCTATC
                    A - T
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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