The detailed information of tRNA gene sequence


Sequence ID>SRA1048453
Genome IDSRR035094.176132
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 114
End posion on genome 189
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attcttataT
tRNA gene sequence 
GCCTCTGTAGCTCAGTTGGTAAGAGCGCCTGTCTCATGAGCAGGAGGTCCCCAGTTCAAA
TCTGGGCAGAGGCATta
Downstream region at tRNA end position 
ttataaaata
Secondary structure (Cloverleaf model)
>SRA1048453	Met	CAT
                   T      ATta ttataaaata
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     G G G T C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T + G
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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